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Cis-eQTLs across different cancer types

In cis-eQTL analysis, we identified 5,606,570 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

 

e.g., "STAD"
e.g., "rs2351010"
e.g., "ERAP2"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs4944061 chr11:74480548 T/C XRRA1 chr11:74518784-74660245:- 0.71 5.78 4.31E-7 Box Plot
ACC rs4944960 chr11:74559446 G/C XRRA1 chr11:74518784-74660245:- 0.74 5.73 5.15E-7 Box Plot
ACC rs4944961 chr11:74559481 C/T XRRA1 chr11:74518784-74660245:- 0.68 5.28 2.55E-6 Box Plot
ACC rs4944965 chr11:74698676 G/A XRRA1 chr11:74518784-74660245:- 0.69 5.6 8.29E-7 Box Plot
ACC rs4944968 chr11:74724276 C/G XRRA1 chr11:74518784-74660245:- 0.69 5.49 1.21E-6 Box Plot
ACC rs4951465 chr1:213045264 A/C LQK1 chr1:213029947-213031480:- 0.84 9.73 2.63E-13 Box Plot
ACC rs4951474 chr1:213088787 G/C LQK1 chr1:213029947-213031480:- 0.72 5.75 4.72E-7 Box Plot
ACC rs4951643 chr1:213010589 A/C LQK1 chr1:213029947-213031480:- 0.74 6.41 4.28E-8 Box Plot
ACC rs4951644 chr1:213045186 G/A LQK1 chr1:213029947-213031480:- 0.84 9.73 2.63E-13 Box Plot
ACC rs4951645 chr1:213045541 T/A LQK1 chr1:213029947-213031480:- 0.84 9.73 2.63E-13 Box Plot
ACC rs4951646 chr1:213047985 T/C LQK1 chr1:213029947-213031480:- 0.84 9.73 2.63E-13 Box Plot
ACC rs4956488 chr4:141797724 A/G IL15 chr4:142557752-142655140:+ 0.87 5.25 2.89E-6 Box Plot
ACC rs508681 chr20:44385064 G/C WFDC3 chr20:44376583-44420571:- 0.86 6.37 5.01E-8 Box Plot
ACC rs522595 chr1:245159739 C/T EFCAB2 chr1:245133007-245290466:+ 0.64 5.85 3.36E-7 Box Plot
ACC rs545679 chr1:245192296 T/C EFCAB2 chr1:245133007-245290466:+ 0.66 5.76 4.53E-7 Box Plot